Reduced space hidden Markov model training

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چکیده

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Reduced space hidden Markov model training

MOTIVATION Complete forward-backward (Baum-Welch) hidden Markov model training cannot take advantage of the linear space, divide-and-conquer sequence alignment algorithms because of the examination of all possible paths rather than the single best path. RESULTS This paper discusses the implementation and performance of checkpoint-based reduced space sequence alignment in the SAM hidden Markov...

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Reduced Space Hidden Markov Model Training

1 Abstract 1.1 Motivation Complete forward-backward (Baum-Welch) hidden Markov model training cannot take advantage of the linear space, divide-and-conquer sequence alignment algorithms because of the examination of all possible paths rather than the single best path. This paper discusses the implementation and performance of checkpoint-based reduced space sequence alignment in the SAM Hidden M...

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Reduced space hidden Markov model

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 1998

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/14.5.401